Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Mir7221-201ENSMUST00000184009 72 ntBASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Gm7063-201ENSMUST00000186840 981 ntBASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha9Q91Y11 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gm12138-201ENSMUST00000122180 951 ntBASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gm6152-201ENSMUST00000151704 340 ntBASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha9Q91Y11 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gm6447-201ENSMUST00000118905 835 ntBASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gm9002-201ENSMUST00000178437 499 ntBASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gm7287-201ENSMUST00000205267 602 ntBASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms