Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga11Q91XY8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gm27437-201ENSMUST00000183429 107 ntBASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gm27772-201ENSMUST00000184900 187 ntBASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga11Q91XY8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Gm18905-201ENSMUST00000205454 928 ntBASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Gm7775-201ENSMUST00000218871 853 ntBASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Gm9063-201ENSMUST00000223299 582 ntBASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms