Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga3Q91XY5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga3Q91XY5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga3Q91XY5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhga3Q91XY5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga3Q91XY5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Gm27838-201ENSMUST00000184829 128 ntBASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga3Q91XY5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga3Q91XY5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga3Q91XY5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga3Q91XY5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhga3Q91XY5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhga3Q91XY5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga3Q91XY5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga3Q91XY5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms