Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Gm13297-201ENSMUST00000120205 934 ntBASIC13.23□□□□□ -0.29
Vsx1Q91V10 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.22□□□□□ -0.29
Vsx1Q91V10 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.22□□□□□ -0.29
Vsx1Q91V10 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Gm25668-201ENSMUST00000157700 129 ntBASIC13.22□□□□□ -0.29
Vsx1Q91V10 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.22□□□□□ -0.29
Vsx1Q91V10 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.22□□□□□ -0.29
Vsx1Q91V10 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vsx1Q91V10 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx1Q91V10 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Gm6023-201ENSMUST00000118217 606 ntBASIC13.21□□□□□ -0.29
Vsx1Q91V10 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.21□□□□□ -0.29
Vsx1Q91V10 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.21□□□□□ -0.29
Vsx1Q91V10 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.21□□□□□ -0.29
Vsx1Q91V10 Gm26315-201ENSMUST00000083890 321 ntBASIC13.21□□□□□ -0.29
Vsx1Q91V10 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx1Q91V10 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.21□□□□□ -0.3
Vsx1Q91V10 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.21□□□□□ -0.3
Vsx1Q91V10 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx1Q91V10 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms