Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cdhr1Q8VHP6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdhr1Q8VHP6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Cdhr1Q8VHP6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gm8213-201ENSMUST00000118191 441 ntBASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gm10156-201ENSMUST00000122364 462 ntBASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gm17420-201ENSMUST00000164753 153 ntBASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gm43818-201ENSMUST00000200605 466 ntBASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdhr1Q8VHP6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm12203-201ENSMUST00000118235 598 ntBASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm12209-201ENSMUST00000120089 596 ntBASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm27331-201ENSMUST00000183705 60 ntBASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm29705-201ENSMUST00000212598 474 ntBASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm10478-201ENSMUST00000084451 396 ntBASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr1Q8VHP6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Cdhr1Q8VHP6 Gm16177-201ENSMUST00000120728 718 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms