Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpa1Q8VEE4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpa1Q8VEE4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpa1Q8VEE4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Rpa1Q8VEE4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Gm11779-201ENSMUST00000118541 368 ntBASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Mir3113-201ENSMUST00000175478 76 ntBASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpa1Q8VEE4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Gm27525-201ENSMUST00000184465 107 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Gm5264-201ENSMUST00000190584 848 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Gm38225-201ENSMUST00000194001 393 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Mir125a-201ENSMUST00000083545 68 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpa1Q8VEE4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms