Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gm12341-201ENSMUST00000119724 503 ntBASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.65□□□□□ -0.38
Clrn1Q8K445 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Mir6392-201ENSMUST00000184924 108 ntBASIC12.65□□□□□ -0.38
Clrn1Q8K445 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.65□□□□□ -0.38
Clrn1Q8K445 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.65□□□□□ -0.38
Clrn1Q8K445 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.65□□□□□ -0.38
Clrn1Q8K445 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn1Q8K445 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clrn1Q8K445 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Clrn1Q8K445 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clrn1Q8K445 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Clrn1Q8K445 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Clrn1Q8K445 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm12403-201ENSMUST00000121384 959 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm18307-201ENSMUST00000206864 949 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm18624-201ENSMUST00000220966 658 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.64□□□□□ -0.39
Clrn1Q8K445 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn1Q8K445 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms