Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfwd3Q8CIK8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Gm15376-201ENSMUST00000122258 783 ntBASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Gm5161-201ENSMUST00000075243 853 ntBASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfwd3Q8CIK8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Mir7654-201ENSMUST00000185082 70 ntBASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gm18018-201ENSMUST00000198273 408 ntBASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfwd3Q8CIK8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms