Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.53□□□□□ -0.24
Clip4Q8CI96 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.53□□□□□ -0.24
Clip4Q8CI96 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.53□□□□□ -0.24
Clip4Q8CI96 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.53□□□□□ -0.24
Clip4Q8CI96 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.53□□□□□ -0.24
Clip4Q8CI96 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clip4Q8CI96 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Clip4Q8CI96 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clip4Q8CI96 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clip4Q8CI96 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clip4Q8CI96 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clip4Q8CI96 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.52□□□□□ -0.25
Clip4Q8CI96 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.52□□□□□ -0.25
Clip4Q8CI96 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.52□□□□□ -0.25
Clip4Q8CI96 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.52□□□□□ -0.25
Clip4Q8CI96 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clip4Q8CI96 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.52□□□□□ -0.25
Clip4Q8CI96 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.52□□□□□ -0.25
Clip4Q8CI96 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.52□□□□□ -0.25
Clip4Q8CI96 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clip4Q8CI96 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.51□□□□□ -0.25
Clip4Q8CI96 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.51□□□□□ -0.25
Clip4Q8CI96 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.51□□□□□ -0.25
Clip4Q8CI96 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clip4Q8CI96 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms