Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc28aQ8CEI3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Ccdc28aQ8CEI3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Gm4995-201ENSMUST00000117247 432 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Gm6415-201ENSMUST00000118488 348 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Gm46209-201ENSMUST00000217912 553 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Gm5779-201ENSMUST00000218467 910 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc28aQ8CEI3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Gm12585-201ENSMUST00000117307 290 ntBASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Gm27525-201ENSMUST00000184465 107 ntBASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc28aQ8CEI3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms