Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Gm18733-201ENSMUST00000173950 856 ntBASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Gm18049-201ENSMUST00000208909 581 ntBASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Gm10819-201ENSMUST00000099988 561 ntBASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc28bQ8CEG5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Gm13015-201ENSMUST00000118674 204 ntBASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Gm5364-201ENSMUST00000216789 889 ntBASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc28bQ8CEG5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc28bQ8CEG5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms