Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm14660-201ENSMUST00000119809 575 ntBASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm27731-201ENSMUST00000185192 107 ntBASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap1Q8BTW8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm12742-201ENSMUST00000117326 410 ntBASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap1Q8BTW8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms