Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gm13453-201ENSMUST00000118708 357 ntBASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gm24420-201ENSMUST00000176676 59 ntBASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gm27680-201ENSMUST00000184192 160 ntBASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpne3Q8BT60 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Gm15770-201ENSMUST00000117498 584 ntBASIC12.96□□□□□ -0.33
Cpne3Q8BT60 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpne3Q8BT60 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cpne3Q8BT60 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms