Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gm4804-201ENSMUST00000182234 999 ntBASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gm9522-201ENSMUST00000182394 926 ntBASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh20Q8BIZ0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gm21470-201ENSMUST00000187680 696 ntBASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh20Q8BIZ0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms