Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Gm28760-201ENSMUST00000185995 736 ntBASIC15.73■□□□□ 0.11
Samm50Q8BGH2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Gm10766-202ENSMUST00000194123 606 ntBASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.73■□□□□ 0.11
Samm50Q8BGH2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Gm12859-201ENSMUST00000117834 427 ntBASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Gm21854-201ENSMUST00000179901 471 ntBASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Samm50Q8BGH2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Gm5425-201ENSMUST00000214125 459 ntBASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Samm50Q8BGH2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Samm50Q8BGH2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Samm50Q8BGH2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.71■□□□□ 0.1
Samm50Q8BGH2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms