Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gm5425-201ENSMUST00000214125 459 ntBASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gm8396-201ENSMUST00000057361 823 ntBASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd3Q6P9Z1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Gm10766-202ENSMUST00000194123 606 ntBASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd3Q6P9Z1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms