Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.17□□□□□ -0.46
Usf1Q61069 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.17□□□□□ -0.46
Usf1Q61069 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.17□□□□□ -0.46
Usf1Q61069 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usf1Q61069 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.17□□□□□ -0.46
Usf1Q61069 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.17□□□□□ -0.46
Usf1Q61069 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.17□□□□□ -0.46
Usf1Q61069 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usf1Q61069 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Usf1Q61069 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usf1Q61069 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Usf1Q61069 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Usf1Q61069 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.16□□□□□ -0.46
Usf1Q61069 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Gm24830-201ENSMUST00000102024 166 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm14017-201ENSMUST00000121934 386 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Gm12363-201ENSMUST00000122250 668 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm25890-201ENSMUST00000177643 165 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Gm22614-201ENSMUST00000178300 165 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm27341-201ENSMUST00000183570 106 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Gm22042-201ENSMUST00000082989 165 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Gm26232-201ENSMUST00000083360 166 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Gm24136-201ENSMUST00000083374 165 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Gm26110-201ENSMUST00000083971 165 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usf1Q61069 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.16□□□□□ -0.46
Usf1Q61069 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usf1Q61069 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.16□□□□□ -0.46
Usf1Q61069 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf1Q61069 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.15□□□□□ -0.46
Usf1Q61069 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.15□□□□□ -0.46
Usf1Q61069 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.15□□□□□ -0.46
Usf1Q61069 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Usf1Q61069 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usf1Q61069 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.15□□□□□ -0.46
Usf1Q61069 Gm14726-201ENSMUST00000120623 896 ntBASIC12.15□□□□□ -0.46
Usf1Q61069 Gm24990-201ENSMUST00000157406 323 ntBASIC12.15□□□□□ -0.46
Usf1Q61069 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.15□□□□□ -0.46
Usf1Q61069 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.15□□□□□ -0.46
Usf1Q61069 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms