Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc6a4Q60857 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Slc6a4Q60857 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.7□□□□□ -0.22
Slc6a4Q60857 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Gm11618-201ENSMUST00000117946 267 ntBASIC13.7□□□□□ -0.22
Slc6a4Q60857 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Gm4271-201ENSMUST00000174444 973 ntBASIC13.7□□□□□ -0.22
Slc6a4Q60857 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.7□□□□□ -0.22
Slc6a4Q60857 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a4Q60857 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.69□□□□□ -0.22
Slc6a4Q60857 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm37922-201ENSMUST00000195596 455 ntBASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm37497-201ENSMUST00000195830 798 ntBASIC13.69□□□□□ -0.22
Slc6a4Q60857 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm43630-201ENSMUST00000201550 776 ntBASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm44069-201ENSMUST00000204898 506 ntBASIC13.69□□□□□ -0.22
Slc6a4Q60857 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.69□□□□□ -0.22
Slc6a4Q60857 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a4Q60857 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm12384-201ENSMUST00000119228 919 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm13123-201ENSMUST00000122173 492 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Snora78-201ENSMUST00000158630 128 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms