Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.89□□□□□ -0.35
ClpbQ60649 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ClpbQ60649 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.89□□□□□ -0.35
ClpbQ60649 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
ClpbQ60649 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.89□□□□□ -0.35
ClpbQ60649 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ClpbQ60649 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ClpbQ60649 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.88□□□□□ -0.35
ClpbQ60649 Gm12341-201ENSMUST00000119724 503 ntBASIC12.88□□□□□ -0.35
ClpbQ60649 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.88□□□□□ -0.35
ClpbQ60649 Gm18041-201ENSMUST00000218210 618 ntBASIC12.88□□□□□ -0.35
ClpbQ60649 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.88□□□□□ -0.35
ClpbQ60649 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.88□□□□□ -0.35
ClpbQ60649 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClpbQ60649 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.88□□□□□ -0.35
ClpbQ60649 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ClpbQ60649 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.87□□□□□ -0.35
ClpbQ60649 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ClpbQ60649 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.87□□□□□ -0.35
ClpbQ60649 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.87□□□□□ -0.35
ClpbQ60649 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.87□□□□□ -0.35
ClpbQ60649 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.87□□□□□ -0.35
ClpbQ60649 Gm9908-201ENSMUST00000211534 448 ntBASIC12.87□□□□□ -0.35
ClpbQ60649 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClpbQ60649 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.86□□□□□ -0.35
ClpbQ60649 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ClpbQ60649 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms