Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm24255-201ENSMUST00000104481 128 ntBASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm15808-201ENSMUST00000119046 604 ntBASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm12363-201ENSMUST00000122250 668 ntBASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm2991-201ENSMUST00000173338 480 ntBASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gm4768-201ENSMUST00000206199 686 ntBASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3aQ3ULJ3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Mir877-201ENSMUST00000104738 85 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Mospd4-201ENSMUST00000180618 576 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm18827-201ENSMUST00000188341 790 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm37489-201ENSMUST00000191883 159 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.05□□□□□ -0.16
Upf3aQ3ULJ3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Gm4986-201ENSMUST00000119731 549 ntBASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Gm26185-201ENSMUST00000157692 266 ntBASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.04□□□□□ -0.16
Upf3aQ3ULJ3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms