Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm42518-201ENSMUST00000196277 938 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm29615-201ENSMUST00000185371 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm28224-201ENSMUST00000186078 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm29001-201ENSMUST00000186177 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm28292-201ENSMUST00000186593 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm28101-201ENSMUST00000187608 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm29076-201ENSMUST00000187689 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm28302-201ENSMUST00000187931 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm28646-201ENSMUST00000188220 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm28205-201ENSMUST00000189177 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm29032-201ENSMUST00000189797 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm28695-201ENSMUST00000190300 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Gm37448-201ENSMUST00000192795 697 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 AY036118-201ENSMUST00000200021 923 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Snora73b-201ENSMUST00000083419 205 ntBASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Spg11Q3UHA3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms