Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gm15240-201ENSMUST00000118156 720 ntBASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gm27772-201ENSMUST00000184900 187 ntBASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhej1Q3KNJ2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm27430-201ENSMUST00000184585 107 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm44333-201ENSMUST00000197168 107 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm44344-201ENSMUST00000200287 129 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm43703-201ENSMUST00000200523 763 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm18905-201ENSMUST00000205454 928 ntBASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhej1Q3KNJ2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Nhej1Q3KNJ2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nhej1Q3KNJ2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhej1Q3KNJ2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhej1Q3KNJ2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhej1Q3KNJ2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nhej1Q3KNJ2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms