Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.13□□□□□ -0.47
Vbp1P61759 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.13□□□□□ -0.47
Vbp1P61759 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Vbp1P61759 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.13□□□□□ -0.47
Vbp1P61759 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Vbp1P61759 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.13□□□□□ -0.47
Vbp1P61759 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Vbp1P61759 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.13□□□□□ -0.47
Vbp1P61759 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vbp1P61759 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.13□□□□□ -0.47
Vbp1P61759 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.13□□□□□ -0.47
Vbp1P61759 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.13□□□□□ -0.47
Vbp1P61759 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vbp1P61759 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Gm13597-201ENSMUST00000121239 375 ntBASIC12.12□□□□□ -0.47
Vbp1P61759 Gm7284-201ENSMUST00000131667 944 ntBASIC12.12□□□□□ -0.47
Vbp1P61759 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.12□□□□□ -0.47
Vbp1P61759 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vbp1P61759 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.12□□□□□ -0.47
Vbp1P61759 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vbp1P61759 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.12□□□□□ -0.47
Vbp1P61759 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.12□□□□□ -0.47
Vbp1P61759 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms