Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.85□□□□□ -0.35
Cdkn2bP55271 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.85□□□□□ -0.35
Cdkn2bP55271 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdkn2bP55271 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.84□□□□□ -0.35
Cdkn2bP55271 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.84□□□□□ -0.35
Cdkn2bP55271 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Gm25948-201ENSMUST00000175334 112 ntBASIC12.84□□□□□ -0.35
Cdkn2bP55271 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.84□□□□□ -0.35
Cdkn2bP55271 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdkn2bP55271 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdkn2bP55271 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdkn2bP55271 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdkn2bP55271 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
Cdkn2bP55271 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Cdkn2bP55271 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cdkn2bP55271 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm12403-201ENSMUST00000121384 959 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.83□□□□□ -0.36
Cdkn2bP55271 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdkn2bP55271 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms