Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nub1P54729 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.46□□□□□ -0.1
Nub1P54729 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Nub1P54729 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nub1P54729 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nub1P54729 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nub1P54729 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Nub1P54729 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nub1P54729 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Nub1P54729 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.45□□□□□ -0.1
Nub1P54729 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nub1P54729 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.45□□□□□ -0.1
Nub1P54729 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.45□□□□□ -0.1
Nub1P54729 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nub1P54729 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nub1P54729 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.45□□□□□ -0.1
Nub1P54729 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Gm13689-201ENSMUST00000119360 685 ntBASIC14.45□□□□□ -0.1
Nub1P54729 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.45□□□□□ -0.1
Nub1P54729 Gm14928-201ENSMUST00000120198 477 ntBASIC14.45□□□□□ -0.1
Nub1P54729 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.45□□□□□ -0.1
Nub1P54729 Gm18307-201ENSMUST00000206864 949 ntBASIC14.45□□□□□ -0.1
Nub1P54729 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.45□□□□□ -0.1
Nub1P54729 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.45□□□□□ -0.1
Nub1P54729 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nub1P54729 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nub1P54729 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nub1P54729 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nub1P54729 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Nub1P54729 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nub1P54729 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Gm15678-201ENSMUST00000117573 960 ntBASIC14.44□□□□□ -0.1
Nub1P54729 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.44□□□□□ -0.1
Nub1P54729 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nub1P54729 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nub1P54729 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nub1P54729 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.43□□□□□ -0.1
Nub1P54729 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nub1P54729 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Nub1P54729 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nub1P54729 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.43□□□□□ -0.1
Nub1P54729 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nub1P54729 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Gm6180-201ENSMUST00000065243 498 ntBASIC14.43□□□□□ -0.1
Nub1P54729 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nub1P54729 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.43□□□□□ -0.1
Nub1P54729 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nub1P54729 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms