Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Fdft1P53798 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Gm15487-201ENSMUST00000122373 465 ntBASIC13.42□□□□□ -0.26
Fdft1P53798 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.42□□□□□ -0.26
Fdft1P53798 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.42□□□□□ -0.26
Fdft1P53798 Gm9522-201ENSMUST00000182394 926 ntBASIC13.42□□□□□ -0.26
Fdft1P53798 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.42□□□□□ -0.26
Fdft1P53798 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.41□□□□□ -0.26
Fdft1P53798 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.41□□□□□ -0.26
Fdft1P53798 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Fdft1P53798 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.41□□□□□ -0.26
Fdft1P53798 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Fdft1P53798 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.41□□□□□ -0.26
Fdft1P53798 Gm15240-201ENSMUST00000118156 720 ntBASIC13.41□□□□□ -0.26
Fdft1P53798 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.41□□□□□ -0.26
Fdft1P53798 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.41□□□□□ -0.26
Fdft1P53798 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Mir8102-201ENSMUST00000184148 139 ntBASIC13.41□□□□□ -0.26
Fdft1P53798 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Gm18905-201ENSMUST00000205454 928 ntBASIC13.41□□□□□ -0.26
Fdft1P53798 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.41□□□□□ -0.26
Fdft1P53798 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.41□□□□□ -0.26
Fdft1P53798 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Fdft1P53798 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.41□□□□□ -0.26
Fdft1P53798 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Fdft1P53798 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Fdft1P53798 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fdft1P53798 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Fdft1P53798 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Fdft1P53798 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Fdft1P53798 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Fdft1P53798 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Fdft1P53798 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.4□□□□□ -0.26
Fdft1P53798 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.4□□□□□ -0.26
Fdft1P53798 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Mir7684-201ENSMUST00000183858 60 ntBASIC13.4□□□□□ -0.26
Fdft1P53798 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Gm17795-201ENSMUST00000214505 757 ntBASIC13.4□□□□□ -0.26
Fdft1P53798 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.4□□□□□ -0.26
Fdft1P53798 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.4□□□□□ -0.26
Fdft1P53798 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Fdft1P53798 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Fdft1P53798 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fdft1P53798 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms