Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 Gm14057-201ENSMUST00000120631 482 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.13□□□□□ -0.47
Rfx3P48381 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.13□□□□□ -0.47
Rfx3P48381 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm8927-201ENSMUST00000181978 981 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 Gm27321-201ENSMUST00000185021 205 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm5425-201ENSMUST00000214125 459 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.13□□□□□ -0.47
Rfx3P48381 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm3222-201ENSMUST00000071282 990 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfx3P48381 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Rfx3P48381 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.13□□□□□ -0.47
Rfx3P48381 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfx3P48381 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rfx3P48381 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rfx3P48381 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.12□□□□□ -0.47
Rfx3P48381 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.12□□□□□ -0.47
Rfx3P48381 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.12□□□□□ -0.47
Rfx3P48381 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Rfx3P48381 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfx3P48381 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rfx3P48381 Gm10766-202ENSMUST00000194123 606 ntBASIC12.12□□□□□ -0.47
Rfx3P48381 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.12□□□□□ -0.47
Rfx3P48381 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfx3P48381 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.12□□□□□ -0.47
Rfx3P48381 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rfx3P48381 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.12□□□□□ -0.47
Rfx3P48381 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfx3P48381 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfx3P48381 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.11□□□□□ -0.47
Rfx3P48381 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.11□□□□□ -0.47
Rfx3P48381 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfx3P48381 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfx3P48381 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rfx3P48381 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rfx3P48381 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfx3P48381 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms