Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps4bP46467 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.63□□□□□ -0.23
Vps4bP46467 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vps4bP46467 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps4bP46467 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps4bP46467 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps4bP46467 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps4bP46467 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.62□□□□□ -0.23
Vps4bP46467 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Vps4bP46467 Gm12151-201ENSMUST00000121374 290 ntBASIC13.62□□□□□ -0.23
Vps4bP46467 Gm38294-201ENSMUST00000192831 381 ntBASIC13.62□□□□□ -0.23
Vps4bP46467 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.62□□□□□ -0.23
Vps4bP46467 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps4bP46467 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vps4bP46467 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.62□□□□□ -0.23
Vps4bP46467 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps4bP46467 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps4bP46467 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.61□□□□□ -0.23
Vps4bP46467 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm4875-201ENSMUST00000118257 786 ntBASIC13.61□□□□□ -0.23
Vps4bP46467 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps4bP46467 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm7775-201ENSMUST00000218871 853 ntBASIC13.61□□□□□ -0.23
Vps4bP46467 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm9063-201ENSMUST00000223299 582 ntBASIC13.61□□□□□ -0.23
Vps4bP46467 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.61□□□□□ -0.23
Vps4bP46467 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps4bP46467 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Vps4bP46467 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps4bP46467 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.61□□□□□ -0.23
Vps4bP46467 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4bP46467 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.61□□□□□ -0.23
Vps4bP46467 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vps4bP46467 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps4bP46467 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps4bP46467 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.6□□□□□ -0.23
Vps4bP46467 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4bP46467 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms