Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm15240-201ENSMUST00000118156 720 ntBASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm14767-201ENSMUST00000121559 586 ntBASIC12.96□□□□□ -0.33
Tnfsf4P43488 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.96□□□□□ -0.33
Tnfsf4P43488 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm27618-201ENSMUST00000183671 60 ntBASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm27680-201ENSMUST00000184192 160 ntBASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm27321-201ENSMUST00000185021 205 ntBASIC12.96□□□□□ -0.33
Tnfsf4P43488 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm38294-201ENSMUST00000192831 381 ntBASIC12.96□□□□□ -0.33
Tnfsf4P43488 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf4P43488 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.95□□□□□ -0.34
Tnfsf4P43488 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Mir874-201ENSMUST00000104769 76 ntBASIC12.95□□□□□ -0.34
Tnfsf4P43488 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.95□□□□□ -0.34
Tnfsf4P43488 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf4P43488 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm27702-201ENSMUST00000184512 56 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm18905-201ENSMUST00000205454 928 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms