Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.88□□□□□ -0.19
HttP42859 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Gm28882-201ENSMUST00000185504 314 ntBASIC13.88□□□□□ -0.19
HttP42859 Gm3793-201ENSMUST00000204973 672 ntBASIC13.88□□□□□ -0.19
HttP42859 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HttP42859 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
HttP42859 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HttP42859 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Gm12990-201ENSMUST00000120372 468 ntBASIC13.87□□□□□ -0.19
HttP42859 Gm11980-201ENSMUST00000121445 986 ntBASIC13.87□□□□□ -0.19
HttP42859 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.87□□□□□ -0.19
HttP42859 Gm45398-201ENSMUST00000210561 165 ntBASIC13.87□□□□□ -0.19
HttP42859 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HttP42859 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.87□□□□□ -0.19
HttP42859 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HttP42859 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.87□□□□□ -0.19
HttP42859 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HttP42859 Gm14644-201ENSMUST00000116671 647 ntBASIC13.87□□□□□ -0.19
HttP42859 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.87□□□□□ -0.19
HttP42859 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.87□□□□□ -0.19
HttP42859 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.87□□□□□ -0.19
HttP42859 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.87□□□□□ -0.19
HttP42859 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.87□□□□□ -0.19
HttP42859 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HttP42859 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.86□□□□□ -0.19
HttP42859 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HttP42859 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.86□□□□□ -0.19
HttP42859 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
HttP42859 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.86□□□□□ -0.19
HttP42859 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.86□□□□□ -0.19
HttP42859 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.86□□□□□ -0.19
HttP42859 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.86□□□□□ -0.19
HttP42859 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.86□□□□□ -0.19
HttP42859 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.86□□□□□ -0.19
HttP42859 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.86□□□□□ -0.19
HttP42859 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HttP42859 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.86□□□□□ -0.19
HttP42859 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.86□□□□□ -0.19
HttP42859 Gm9132-201ENSMUST00000210182 832 ntBASIC13.86□□□□□ -0.19
HttP42859 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.86□□□□□ -0.19
HttP42859 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.86□□□□□ -0.19
HttP42859 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
HttP42859 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.86□□□□□ -0.19
HttP42859 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
HttP42859 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.86□□□□□ -0.19
HttP42859 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HttP42859 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.86□□□□□ -0.19
HttP42859 Gm28071-201ENSMUST00000190355 478 ntBASIC13.86□□□□□ -0.19
HttP42859 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.86□□□□□ -0.19
HttP42859 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.86□□□□□ -0.19
HttP42859 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms