Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Gm3436-201ENSMUST00000179930 840 ntBASIC12.61□□□□□ -0.39
Sox6P40645 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox6P40645 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox6P40645 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox6P40645 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.61□□□□□ -0.39
Sox6P40645 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.61□□□□□ -0.39
Sox6P40645 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox6P40645 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox6P40645 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Gm12428-201ENSMUST00000119844 727 ntBASIC12.6□□□□□ -0.39
Sox6P40645 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.6□□□□□ -0.39
Sox6P40645 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.6□□□□□ -0.39
Sox6P40645 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox6P40645 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox6P40645 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Sox6P40645 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sox6P40645 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.6□□□□□ -0.39
Sox6P40645 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox6P40645 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox6P40645 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox6P40645 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sox6P40645 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox6P40645 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Sox6P40645 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox6P40645 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox6P40645 Mir7023-201ENSMUST00000185093 64 ntBASIC12.59□□□□□ -0.39
Sox6P40645 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox6P40645 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox6P40645 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.59□□□□□ -0.39
Sox6P40645 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox6P40645 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox6P40645 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox6P40645 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms