Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Chd1P40201 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Chd1P40201 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.66■□□□□ 0.74
Chd1P40201 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC19.66■□□□□ 0.74
Chd1P40201 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 AC123619.2-202ENSMUST00000225097 1568 ntBASIC19.66■□□□□ 0.74
Chd1P40201 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chd1P40201 Gm11989-201ENSMUST00000117240 672 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Gm11362-201ENSMUST00000118838 850 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Gm6397-201ENSMUST00000161973 1069 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Gm17889-201ENSMUST00000198410 598 ntBASIC19.65■□□□□ 0.74
Chd1P40201 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC19.65■□□□□ 0.74
Chd1P40201 Gm7551-201ENSMUST00000089593 1074 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chd1P40201 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC19.65■□□□□ 0.74
Chd1P40201 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chd1P40201 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC19.65■□□□□ 0.74
Chd1P40201 Gm7541-201ENSMUST00000118361 535 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Chd1P40201 Olfr1347-205ENSMUST00000220413 964 ntBASIC19.65■□□□□ 0.74
Chd1P40201 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chd1P40201 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1P40201 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Chd1P40201 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Chd1P40201 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Gm26513-201ENSMUST00000181802 2489 ntBASIC19.64■□□□□ 0.73
Chd1P40201 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Gm11801-201ENSMUST00000117807 746 ntBASIC19.64■□□□□ 0.73
Chd1P40201 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC19.64■□□□□ 0.73
Chd1P40201 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC19.64■□□□□ 0.73
Chd1P40201 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC19.64■□□□□ 0.73
Chd1P40201 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 AC154290.1-201ENSMUST00000223786 1240 ntBASIC19.64■□□□□ 0.73
Chd1P40201 Gm9873-201ENSMUST00000063891 1097 ntBASIC19.64■□□□□ 0.73
Chd1P40201 Gm9996-201ENSMUST00000070359 913 ntBASIC19.64■□□□□ 0.73
Chd1P40201 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Chd1P40201 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC19.64■□□□□ 0.73
Chd1P40201 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.64■□□□□ 0.73
Chd1P40201 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1P40201 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chd1P40201 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Chd1P40201 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Gm13809-201ENSMUST00000117921 597 ntBASIC19.63■□□□□ 0.73
Chd1P40201 Gm16166-201ENSMUST00000118291 787 ntBASIC19.63■□□□□ 0.73
Chd1P40201 Gm11451-201ENSMUST00000118946 630 ntBASIC19.63■□□□□ 0.73
Chd1P40201 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC19.63■□□□□ 0.73
Chd1P40201 Gm15595-201ENSMUST00000120840 961 ntBASIC19.63■□□□□ 0.73
Chd1P40201 Gm9139-201ENSMUST00000218817 700 ntBASIC19.63■□□□□ 0.73
Chd1P40201 Gm807-202ENSMUST00000224929 408 ntBASIC19.63■□□□□ 0.73
Chd1P40201 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Chd1P40201 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chd1P40201 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chd1P40201 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1P40201 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms