Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Hoxc5P32043 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc5P32043 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Mir6956-201ENSMUST00000183598 62 ntBASIC12.45□□□□□ -0.42
Hoxc5P32043 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.45□□□□□ -0.42
Hoxc5P32043 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hoxc5P32043 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc5P32043 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.44□□□□□ -0.42
Hoxc5P32043 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Gm24420-201ENSMUST00000176676 59 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc5P32043 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.44□□□□□ -0.42
Hoxc5P32043 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc5P32043 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Hoxc5P32043 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.43□□□□□ -0.42
Hoxc5P32043 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.43□□□□□ -0.42
Hoxc5P32043 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms