Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.35□□□□□ -0.43
Nedd8P29595 Gm6550-201ENSMUST00000187574 993 ntBASIC12.35□□□□□ -0.43
Nedd8P29595 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.35□□□□□ -0.43
Nedd8P29595 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.35□□□□□ -0.43
Nedd8P29595 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Nedd8P29595 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nedd8P29595 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nedd8P29595 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.35□□□□□ -0.43
Nedd8P29595 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nedd8P29595 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nedd8P29595 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nedd8P29595 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nedd8P29595 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Nedd8P29595 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.34□□□□□ -0.43
Nedd8P29595 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Nedd8P29595 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.34□□□□□ -0.43
Nedd8P29595 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.34□□□□□ -0.43
Nedd8P29595 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.34□□□□□ -0.43
Nedd8P29595 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Nedd8P29595 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nedd8P29595 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.34□□□□□ -0.43
Nedd8P29595 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.34□□□□□ -0.43
Nedd8P29595 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nedd8P29595 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nedd8P29595 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Nedd8P29595 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nedd8P29595 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nedd8P29595 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nedd8P29595 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nedd8P29595 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nedd8P29595 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.33□□□□□ -0.44
Nedd8P29595 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.33□□□□□ -0.44
Nedd8P29595 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.33□□□□□ -0.44
Nedd8P29595 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.33□□□□□ -0.44
Nedd8P29595 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.33□□□□□ -0.44
Nedd8P29595 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nedd8P29595 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.33□□□□□ -0.44
Nedd8P29595 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nedd8P29595 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms