Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clk1P22518 Gm13385-201ENSMUST00000121089 220 ntBASIC12.56□□□□□ -0.4
Clk1P22518 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Clk1P22518 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Clk1P22518 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.56□□□□□ -0.4
Clk1P22518 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Clk1P22518 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Clk1P22518 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Clk1P22518 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Clk1P22518 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.55□□□□□ -0.4
Clk1P22518 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.55□□□□□ -0.4
Clk1P22518 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.55□□□□□ -0.4
Clk1P22518 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.55□□□□□ -0.4
Clk1P22518 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Clk1P22518 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.55□□□□□ -0.4
Clk1P22518 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.55□□□□□ -0.4
Clk1P22518 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clk1P22518 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Clk1P22518 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Clk1P22518 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.54□□□□□ -0.4
Clk1P22518 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.54□□□□□ -0.4
Clk1P22518 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.54□□□□□ -0.4
Clk1P22518 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.54□□□□□ -0.4
Clk1P22518 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.54□□□□□ -0.4
Clk1P22518 Gm8927-201ENSMUST00000181978 981 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms