Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Gm8396-201ENSMUST00000057361 823 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
BdnfP21237 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
BdnfP21237 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.88□□□□□ -0.35
BdnfP21237 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
BdnfP21237 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
BdnfP21237 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.88□□□□□ -0.35
BdnfP21237 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
BdnfP21237 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.88□□□□□ -0.35
BdnfP21237 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.88□□□□□ -0.35
BdnfP21237 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
BdnfP21237 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
BdnfP21237 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.88□□□□□ -0.35
BdnfP21237 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.88□□□□□ -0.35
BdnfP21237 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BdnfP21237 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
BdnfP21237 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.87□□□□□ -0.35
BdnfP21237 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.87□□□□□ -0.35
BdnfP21237 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
BdnfP21237 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
BdnfP21237 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
BdnfP21237 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.87□□□□□ -0.35
BdnfP21237 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.87□□□□□ -0.35
BdnfP21237 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.87□□□□□ -0.35
BdnfP21237 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
BdnfP21237 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.87□□□□□ -0.35
BdnfP21237 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
BdnfP21237 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.87□□□□□ -0.35
BdnfP21237 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
BdnfP21237 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms