Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Gm45668-201ENSMUST00000211271 493 ntBASIC12.84□□□□□ -0.35
Hoxb9P20615 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.84□□□□□ -0.35
Hoxb9P20615 Gm26315-201ENSMUST00000083890 321 ntBASIC12.84□□□□□ -0.35
Hoxb9P20615 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.84□□□□□ -0.35
Hoxb9P20615 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxb9P20615 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxb9P20615 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxb9P20615 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.83□□□□□ -0.35
Hoxb9P20615 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hoxb9P20615 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Hoxb9P20615 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxb9P20615 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.83□□□□□ -0.36
Hoxb9P20615 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hoxb9P20615 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.83□□□□□ -0.36
Hoxb9P20615 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.83□□□□□ -0.36
Hoxb9P20615 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.83□□□□□ -0.36
Hoxb9P20615 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Gm15823-201ENSMUST00000064305 670 ntBASIC12.83□□□□□ -0.36
Hoxb9P20615 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxb9P20615 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxb9P20615 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.83□□□□□ -0.36
Hoxb9P20615 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hoxb9P20615 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb9P20615 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm2495-201ENSMUST00000191160 466 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 Gm6983-201ENSMUST00000214912 628 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.82□□□□□ -0.36
Hoxb9P20615 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb9P20615 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms