Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl3P10855 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccl3P10855 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Gm11964-201ENSMUST00000120982 444 ntBASIC11.78□□□□□ -0.52
Ccl3P10855 Gm2383-201ENSMUST00000181461 807 ntBASIC11.78□□□□□ -0.52
Ccl3P10855 Gm6458-201ENSMUST00000211573 635 ntBASIC11.78□□□□□ -0.52
Ccl3P10855 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.78□□□□□ -0.52
Ccl3P10855 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.78□□□□□ -0.52
Ccl3P10855 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccl3P10855 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ccl3P10855 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccl3P10855 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ccl3P10855 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl3P10855 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Ccl3P10855 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl3P10855 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl3P10855 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl3P10855 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl3P10855 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl3P10855 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.77□□□□□ -0.53
Ccl3P10855 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccl3P10855 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccl3P10855 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccl3P10855 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccl3P10855 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccl3P10855 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.77□□□□□ -0.53
Ccl3P10855 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.77□□□□□ -0.53
Ccl3P10855 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.77□□□□□ -0.53
Ccl3P10855 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccl3P10855 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccl3P10855 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.77□□□□□ -0.53
Ccl3P10855 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccl3P10855 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl3P10855 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccl3P10855 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm11222-201ENSMUST00000119005 738 ntBASIC11.76□□□□□ -0.53
Ccl3P10855 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ccl3P10855 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccl3P10855 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms