Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
PtcraP0C6B2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
PtcraP0C6B2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Gm18018-201ENSMUST00000198273 408 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 Gm42790-201ENSMUST00000201268 969 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 Gm26315-201ENSMUST00000083890 321 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.66□□□□□ -0.54
PtcraP0C6B2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
PtcraP0C6B2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.65□□□□□ -0.54
PtcraP0C6B2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.65□□□□□ -0.54
PtcraP0C6B2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm5687-201ENSMUST00000118252 640 ntBASIC11.65□□□□□ -0.54
PtcraP0C6B2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.65□□□□□ -0.54
PtcraP0C6B2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.65□□□□□ -0.54
PtcraP0C6B2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.65□□□□□ -0.54
PtcraP0C6B2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
PtcraP0C6B2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
PtcraP0C6B2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.65□□□□□ -0.55
PtcraP0C6B2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms