Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CfdP03953 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CfdP03953 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CfdP03953 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.19□□□□□ -0.62
CfdP03953 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
CfdP03953 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.19□□□□□ -0.62
CfdP03953 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.19□□□□□ -0.62
CfdP03953 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.19□□□□□ -0.62
CfdP03953 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CfdP03953 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Mir7221-201ENSMUST00000184009 72 ntBASIC11.19□□□□□ -0.62
CfdP03953 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.19□□□□□ -0.62
CfdP03953 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CfdP03953 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.19□□□□□ -0.62
CfdP03953 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CfdP03953 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CfdP03953 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
CfdP03953 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.18□□□□□ -0.62
CfdP03953 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.18□□□□□ -0.62
CfdP03953 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.18□□□□□ -0.62
CfdP03953 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.18□□□□□ -0.62
CfdP03953 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.18□□□□□ -0.62
CfdP03953 Gm45841-201ENSMUST00000207700 164 ntBASIC11.18□□□□□ -0.62
CfdP03953 Gm18057-201ENSMUST00000208220 503 ntBASIC11.18□□□□□ -0.62
CfdP03953 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.18□□□□□ -0.62
CfdP03953 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.18□□□□□ -0.62
CfdP03953 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CfdP03953 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.18□□□□□ -0.62
CfdP03953 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.18□□□□□ -0.62
CfdP03953 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
CfdP03953 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CfdP03953 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.18□□□□□ -0.62
CfdP03953 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.17□□□□□ -0.62
CfdP03953 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Gm13015-201ENSMUST00000118674 204 ntBASIC11.17□□□□□ -0.62
CfdP03953 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms