Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hoxa3P02831 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa3P02831 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa3P02831 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa3P02831 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hoxa3P02831 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.25□□□□□ -0.61
Hoxa3P02831 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Gm12928-201ENSMUST00000117115 573 ntBASIC11.25□□□□□ -0.61
Hoxa3P02831 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.25□□□□□ -0.61
Hoxa3P02831 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa3P02831 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.25□□□□□ -0.61
Hoxa3P02831 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa3P02831 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxa3P02831 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.25□□□□□ -0.61
Hoxa3P02831 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa3P02831 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Mir1894-201ENSMUST00000122802 81 ntBASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
Hoxa3P02831 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm27839-201ENSMUST00000184242 106 ntBASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm7287-201ENSMUST00000205267 602 ntBASIC11.24□□□□□ -0.61
Hoxa3P02831 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxa3P02831 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxa3P02831 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa3P02831 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms