Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.59□□□□□ -0.71
P01788 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Gm6415-201ENSMUST00000118488 348 ntBASIC10.59□□□□□ -0.71
P01788 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.59□□□□□ -0.71
P01788 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.59□□□□□ -0.71
P01788 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
P01788 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
P01788 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.59□□□□□ -0.71
P01788 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.59□□□□□ -0.71
P01788 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P01788 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
P01788 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
P01788 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.58□□□□□ -0.72
P01788 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
P01788 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01788 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.58□□□□□ -0.72
P01788 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.58□□□□□ -0.72
P01788 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01788 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.58□□□□□ -0.72
P01788 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.58□□□□□ -0.72
P01788 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.58□□□□□ -0.72
P01788 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.58□□□□□ -0.72
P01788 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01788 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
P01788 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.58□□□□□ -0.72
P01788 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.58□□□□□ -0.72
P01788 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.58□□□□□ -0.72
P01788 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.58□□□□□ -0.72
P01788 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.58□□□□□ -0.72
P01788 Gm44771-201ENSMUST00000206975 626 ntBASIC10.58□□□□□ -0.72
P01788 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.58□□□□□ -0.72
P01788 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.58□□□□□ -0.72
P01788 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P01788 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.58□□□□□ -0.72
P01788 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01788 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P01788 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
P01788 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P01788 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.57□□□□□ -0.72
P01788 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms