Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cops6O88545 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cops6O88545 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cops6O88545 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cops6O88545 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.29■□□□□ 0.2
Cops6O88545 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.29■□□□□ 0.2
Cops6O88545 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.29■□□□□ 0.2
Cops6O88545 Gm6334-201ENSMUST00000207083 228 ntBASIC16.29■□□□□ 0.2
Cops6O88545 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.29■□□□□ 0.2
Cops6O88545 Cts7-204ENSMUST00000225321 1257 ntBASIC16.29■□□□□ 0.2
Cops6O88545 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Gm24526-201ENSMUST00000082921 158 ntBASIC16.29■□□□□ 0.2
Cops6O88545 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.29■□□□□ 0.2
Cops6O88545 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.29■□□□□ 0.2
Cops6O88545 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops6O88545 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.29■□□□□ 0.2
Cops6O88545 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.28■□□□□ 0.2
Cops6O88545 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Cops6O88545 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cops6O88545 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cops6O88545 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.28■□□□□ 0.2
Cops6O88545 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.28■□□□□ 0.2
Cops6O88545 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.28■□□□□ 0.2
Cops6O88545 Gm45865-201ENSMUST00000211815 945 ntBASIC16.28■□□□□ 0.2
Cops6O88545 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.28■□□□□ 0.2
Cops6O88545 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Cops6O88545 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cops6O88545 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cops6O88545 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Cops6O88545 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Cops6O88545 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops6O88545 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.27■□□□□ 0.2
Cops6O88545 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.27■□□□□ 0.2
Cops6O88545 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Gm12241-201ENSMUST00000118330 726 ntBASIC16.27■□□□□ 0.2
Cops6O88545 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.27■□□□□ 0.2
Cops6O88545 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Gm3890-201ENSMUST00000182416 207 ntBASIC16.27■□□□□ 0.2
Cops6O88545 Gm44364-201ENSMUST00000198368 141 ntBASIC16.27■□□□□ 0.2
Cops6O88545 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.27■□□□□ 0.2
Cops6O88545 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Gm8227-201ENSMUST00000223306 571 ntBASIC16.27■□□□□ 0.2
Cops6O88545 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.27■□□□□ 0.2
Cops6O88545 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops6O88545 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.27■□□□□ 0.19
Cops6O88545 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cops6O88545 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cops6O88545 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cops6O88545 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Cops6O88545 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops6O88545 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops6O88545 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cops6O88545 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cops6O88545 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cops6O88545 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops6O88545 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops6O88545 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.26■□□□□ 0.19
Cops6O88545 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops6O88545 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms