Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.42□□□□□ -0.1
Nr1i3O35627 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Nr1i3O35627 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.42□□□□□ -0.1
Nr1i3O35627 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.42□□□□□ -0.1
Nr1i3O35627 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Gm5279-201ENSMUST00000199575 745 ntBASIC14.42□□□□□ -0.1
Nr1i3O35627 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.42□□□□□ -0.1
Nr1i3O35627 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.42□□□□□ -0.1
Nr1i3O35627 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.42□□□□□ -0.1
Nr1i3O35627 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nr1i3O35627 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1i3O35627 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.41□□□□□ -0.1
Nr1i3O35627 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm26464-201ENSMUST00000157094 305 ntBASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm19078-201ENSMUST00000206311 727 ntBASIC14.41□□□□□ -0.1
Nr1i3O35627 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.41□□□□□ -0.1
Nr1i3O35627 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.41□□□□□ -0.1
Nr1i3O35627 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1i3O35627 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nr1i3O35627 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Nr1i3O35627 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm11524-201ENSMUST00000119349 807 ntBASIC14.4□□□□□ -0.1
Nr1i3O35627 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.4□□□□□ -0.1
Nr1i3O35627 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nr1i3O35627 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm27838-201ENSMUST00000184829 128 ntBASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.4□□□□□ -0.1
Nr1i3O35627 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm20445-201ENSMUST00000061905 565 ntBASIC14.4□□□□□ -0.1
Nr1i3O35627 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
Nr1i3O35627 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nr1i3O35627 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1i3O35627 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.4□□□□□ -0.11
Nr1i3O35627 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms