Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.94□□□□□ -0.18
Ebf3O08791 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf3O08791 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ebf3O08791 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.93□□□□□ -0.18
Ebf3O08791 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ebf3O08791 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Ebf3O08791 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.93□□□□□ -0.18
Ebf3O08791 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.93□□□□□ -0.18
Ebf3O08791 Gm5370-201ENSMUST00000187187 574 ntBASIC13.93□□□□□ -0.18
Ebf3O08791 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.93□□□□□ -0.18
Ebf3O08791 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Gm24447-201ENSMUST00000083977 338 ntBASIC13.93□□□□□ -0.18
Ebf3O08791 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ebf3O08791 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Ebf3O08791 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf3O08791 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ebf3O08791 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.92□□□□□ -0.18
Ebf3O08791 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Mir1247-201ENSMUST00000116706 82 ntBASIC13.92□□□□□ -0.18
Ebf3O08791 Gm5187-201ENSMUST00000117317 991 ntBASIC13.92□□□□□ -0.18
Ebf3O08791 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.92□□□□□ -0.18
Ebf3O08791 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Gm8810-201ENSMUST00000172895 754 ntBASIC13.92□□□□□ -0.18
Ebf3O08791 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.92□□□□□ -0.18
Ebf3O08791 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.92□□□□□ -0.18
Ebf3O08791 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ebf3O08791 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.92□□□□□ -0.18
Ebf3O08791 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Ebf3O08791 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.92□□□□□ -0.18
Ebf3O08791 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ebf3O08791 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf3O08791 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ebf3O08791 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ebf3O08791 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Ebf3O08791 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms