Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.68■□□□□ 0.1
Tcof1O08784 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.68■□□□□ 0.1
Tcof1O08784 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.68■□□□□ 0.1
Tcof1O08784 Gm6091-201ENSMUST00000098307 165 ntBASIC15.68■□□□□ 0.1
Tcof1O08784 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tcof1O08784 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tcof1O08784 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tcof1O08784 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.67■□□□□ 0.1
Tcof1O08784 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.67■□□□□ 0.1
Tcof1O08784 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.67■□□□□ 0.1
Tcof1O08784 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.67■□□□□ 0.1
Tcof1O08784 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Tcof1O08784 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.67■□□□□ 0.1
Tcof1O08784 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.67■□□□□ 0.1
Tcof1O08784 Gm8810-201ENSMUST00000172895 754 ntBASIC15.67■□□□□ 0.1
Tcof1O08784 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.67■□□□□ 0.1
Tcof1O08784 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.67■□□□□ 0.1
Tcof1O08784 Mir6420-201ENSMUST00000185032 102 ntBASIC15.67■□□□□ 0.1
Tcof1O08784 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.67■□□□□ 0.1
Tcof1O08784 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcof1O08784 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tcof1O08784 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.66■□□□□ 0.1
Tcof1O08784 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.66■□□□□ 0.1
Tcof1O08784 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.66■□□□□ 0.1
Tcof1O08784 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Gm12742-201ENSMUST00000117326 410 ntBASIC15.66■□□□□ 0.1
Tcof1O08784 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.66■□□□□ 0.1
Tcof1O08784 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.66■□□□□ 0.1
Tcof1O08784 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcof1O08784 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tcof1O08784 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.65■□□□□ 0.1
Tcof1O08784 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Tcof1O08784 Gm12957-201ENSMUST00000117835 377 ntBASIC15.65■□□□□ 0.1
Tcof1O08784 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.65■□□□□ 0.1
Tcof1O08784 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.65■□□□□ 0.1
Tcof1O08784 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.65■□□□□ 0.1
Tcof1O08784 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.65■□□□□ 0.1
Tcof1O08784 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tcof1O08784 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcof1O08784 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcof1O08784 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcof1O08784 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcof1O08784 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcof1O08784 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tcof1O08784 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms