Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Gm27989-201ENSMUST00000184721 107 ntBASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Gm45841-201ENSMUST00000207700 164 ntBASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Gm24447-201ENSMUST00000083977 338 ntBASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf11bO08712 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Gm21854-201ENSMUST00000179901 471 ntBASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Gm5161-201ENSMUST00000075243 853 ntBASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf11bO08712 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms