Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.42□□□□□ -0.1
Usp35M0QWN7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm27772-201ENSMUST00000184900 187 ntBASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm2495-201ENSMUST00000191160 466 ntBASIC14.42□□□□□ -0.1
Usp35M0QWN7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.42□□□□□ -0.1
Usp35M0QWN7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.42□□□□□ -0.1
Usp35M0QWN7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm11425-201ENSMUST00000119608 498 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm15429-201ENSMUST00000151268 798 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm9396-201ENSMUST00000076703 567 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.41□□□□□ -0.1
Usp35M0QWN7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Usp35M0QWN7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.4□□□□□ -0.1
Usp35M0QWN7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Gm27839-201ENSMUST00000184242 106 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms