Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm43378-201ENSMUST00000199336 582 ntBASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.09■□□□□ 0.17
NpcdF8VQB8 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.09■□□□□ 0.17
NpcdF8VQB8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NpcdF8VQB8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NpcdF8VQB8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
NpcdF8VQB8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NpcdF8VQB8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.08■□□□□ 0.17
NpcdF8VQB8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Gm11637-201ENSMUST00000120601 592 ntBASIC16.08■□□□□ 0.16
NpcdF8VQB8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.08■□□□□ 0.16
NpcdF8VQB8 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Gm8099-201ENSMUST00000200510 742 ntBASIC16.08■□□□□ 0.16
NpcdF8VQB8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.08■□□□□ 0.16
NpcdF8VQB8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Gm10434-201ENSMUST00000101158 471 ntBASIC16.07■□□□□ 0.16
NpcdF8VQB8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Gm14277-201ENSMUST00000121195 360 ntBASIC16.07■□□□□ 0.16
NpcdF8VQB8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.07■□□□□ 0.16
NpcdF8VQB8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.07■□□□□ 0.16
NpcdF8VQB8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.07■□□□□ 0.16
NpcdF8VQB8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.07■□□□□ 0.16
NpcdF8VQB8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.07■□□□□ 0.16
NpcdF8VQB8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms