Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm11425-201ENSMUST00000119608 498 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm9396-201ENSMUST00000076703 567 ntBASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdhb9E9Q5G2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Gm37497-201ENSMUST00000195830 798 ntBASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Gm29705-201ENSMUST00000212598 474 ntBASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb9E9Q5G2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Gm16202-201ENSMUST00000117532 544 ntBASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Gm11618-201ENSMUST00000117946 267 ntBASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Gm16177-201ENSMUST00000120728 718 ntBASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Mir7085-201ENSMUST00000184353 66 ntBASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms